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Molecular dynamics simulations
Person
Class
Person
Publication
Programmes
RNDr. Ivan Barvík Ph.D.
Academic staff at Faculty of Mathematics and Physics
12 classes
115 publications
Classes
class
Computer Modelling of Biomolecules
NBCM316 |
Faculty of Mathematics and Physics
class
Molecular dynamics - calculations of free energy
NBCM181 |
Faculty of Mathematics and Physics
class
Fundamentals of Computer Physics I
NBCM321 |
Faculty of Mathematics and Physics
class
Fundamentals of Computer Physics II
NBCM322 |
Faculty of Mathematics and Physics
class
Molecular dynamics I
NBCM346 |
Faculty of Mathematics and Physics
class
Molecular dynamics II
NBCM347 |
Faculty of Mathematics and Physics
class
Introductory seminar on computational physics
NEVF067 |
Faculty of Mathematics and Physics
class
Numerical Methods of Computational Physics I
NEVF523 |
Faculty of Mathematics and Physics
class
Numerical Methods of Computational Physics II
NEVF529 |
Faculty of Mathematics and Physics
class
Computational Physics II
NEVF532 |
Faculty of Mathematics and Physics
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Publications
publication
Substrate recognition by norovirus polymerase: microsecond molecular dynamics study
2013 |
Faculty of Mathematics and Physics
publication
3'-Deoxy phosphoramidate dinucleosides as improved inhibitors of hepatitis C virus subgenomic replicon and NS5B polymerase activity
2010 |
Faculty of Mathematics and Physics
publication
E. Coli RNase HI and the Phosphonate-DNA/RNA Hybrid: Molecular Dynamics Simulations
+1
2005 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of interstrand linkers stabilizing double/triple helical nucleic acids potentially usable in antisense/antigene therapy
2004 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of the complex between E.coli RNase HI and the phosphate/phosphonate DNA:RNA hybrid
2004 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of DNA triplexes containing modified Hoogsteen strands - potential candidates for antigene therapy
2003 |
Faculty of Mathematics and Physics
publication
Molecular Dynamics Simulations of Potential Candidates for Antigene Therapy
2003 |
Faculty of Mathematics and Physics
publication
Fully solvated molecular dynamics simulations of duplexes formed by modified oligonucleotides with nonisosteric phosphonate and xylo internucleoside linkages and their natural counterpart
2001 |
Faculty of Mathematics and Physics
publication
Fully solvated molecular dynamics simulations of a duplex formed by a modified oligonucleotide with the isosteric phosphonate internucleoside linkages and its natural counterpart
2000 |
Faculty of Mathematics and Physics
publication
Molecular Dynamics Simulations of the UACG tetraloop in the very short hairpin
1998 |
Faculty of Mathematics and Physics
Load more publications (105)
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