- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Chemistry for Teacher Education with double curriculum study Geology for Teacher Education🇨🇿 Bc. | Faculty of Science
- English Language and Literature for Teacher Education with double curriculum study Russian Language for Teacher Education🇨🇿 Bc. | Faculty of Arts
- German Language and Literature for Teacher Education with double curriculum study Russian Language for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Russian Language for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Russian Language for Teacher Education with double curriculum study History for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Russian Language for Teacher Education with double curriculum study Latin Language and Literature for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Russian Language for Teacher Education with double curriculum study Spanish Language and Literature for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Russian Language and Literature🇨🇿 NMgr. | Faculty of Arts
- Sociology with specialisation in Sociology, Public and Politics🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Social Anthropology and Qualitative Research🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Applied Research and Its Methodology🇨🇿 NMgr. | Faculty of Social Sciences
- Organic Chemistry🇨🇿 NMgr. | Faculty of Science
- Medicinal Chemistry🇨🇿 NMgr. | Faculty of Science
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- History and Area Studies🇬🇧 Bc. | Faculty of Social Sciences
- Musicology with double curriculum study History🇨🇿 Bc. | Faculty of Arts
- Czech Language and Literature with double curriculum study History🇨🇿 Bc. | Faculty of Arts
- Geography for Teacher Education with double curriculum study History for Teacher Education🇨🇿 Bc. | Faculty of Science
- Geography for Teacher Education with double curriculum study Biology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Geography and Cartography🇨🇿 Bc. | Faculty of Science
- Geography for Teacher Education🇨🇿 Bc. | Faculty of Science
- Applied Geography with specialisation in Physical Geography and Geoinformatics🇨🇿 Bc. | Faculty of Science
- Geography for Teacher Education with double curriculum study Mathematics for Teacher Education🇨🇿 Bc. | Faculty of Science
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Bioinformatics🇨🇿 Bc. | Faculty of Science