- International Relations🇨🇿 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in History and Society🇬🇧 NMgr. | Faculty of Social Sciences
- Social Sciences🇬🇧 Bc. | Faculty of Social Sciences
- International Security Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Peace and Conflict Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Strategic and War Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Global and Regional Security🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Security, Technology and Society🇨🇿 NMgr. | Faculty of Social Sciences
- Political and Regional Geography🇨🇿 NMgr. | Faculty of Science
- Psychology with special pedagogy extension🇨🇿 Bc. | Faculty of Education
- English Language and Linguistics🇨🇿 NMgr. | Faculty of Arts
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Euroasian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies +1🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Clinical and Toxicological Analysis🇨🇿 Bc. | Faculty of Science
- General Geography🇨🇿 PhD. | Faculty of Science
- Applied Sport Science🇨🇿 NMgr. | Faculty of Physical Education and Sport
- Sociology +3🇨🇿 PhD. | Faculty of Arts
- Sociology with specialisation in Social Anthropology and Qualitative Research🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Applied Research and Its Methodology🇨🇿 NMgr. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Historical Sociology +1🇨🇿 PhD. | Faculty of Humanities