- Computer Science with specialisation in Programming and Software Development +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Systems Programming +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Parasitology🇨🇿 NMgr. | Faculty of Science
- East European Studies with specialisation in Lithuanian🇨🇿 NMgr. | Faculty of Arts
- East European Studies with specialisation in Latvian🇨🇿 NMgr. | Faculty of Arts
- Teacher Education of History for Upper Secondary Schools with double curriculum study Teacher Education of Philosophy for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Arts
- Greek and Latin Studies with specialisation in Medieval Latin Studies with double curriculum study Translation Studies with specialisation in Translation Studies: Czech – German🇨🇿 NMgr. | Faculty of Arts
- Greek and Latin Studies with specialisation in Medieval Latin Studies with double curriculum study History – General History with specialisation in Civilization and Culture of the Medieval Europe🇨🇿 NMgr. | Faculty of Arts
- Philosophy🇨🇿 NMgr. | Faculty of Arts
- Teacher Education of French Language and Literature for Upper Secondary Schools with double curriculum study Teacher Education of Philosophy for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Arts
- Computer Science - Software Systems🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Computer Science - Software and Data Engineering🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Social Epidemiology🇨🇿 NMgr. | Faculty of Science
- Biology🇨🇿 Bc. | Faculty of Science