- Deaf Studies🇨🇿 Bc. | Faculty of Arts
- International Masters in Economy, State and Society with specialisation in Economy and Business🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Physical Education for Upper Secondary Schools +1🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of History for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Mathematics for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Biology for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Physical Geography and Geoecology🇨🇿 NMgr. | Faculty of Science
- Landscape and Society🇨🇿 NMgr. | Faculty of Science
- Communication Studies with specialisation in Journalism🇨🇿 Bc. | Faculty of Social Sciences
- Political and Regional Geography🇨🇿 NMgr. | Faculty of Science
- General Mathematics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Mathematical Modelling in Physics and Technology🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Teacher Education of Biology for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Education towards Health for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Teacher Education of Chemistry for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Education towards Health for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Teacher Education of Education towards Health for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Biology for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Teacher Education of Education towards Health for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Chemistry for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Teacher Education of Education towards Health for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Physical Education for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Teacher Education of Physical Education for Lower and Upper Secondary Schools with double curriculum study Teacher Education of Education towards Health for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Education
- Special Education +1🇨🇿 Bc. | Faculty of Education
- Catholic Theology +1🇨🇿 PhD. | Catholic Theological Faculty
- Clinical and Toxicological Analysis🇨🇿 NMgr. | Faculty of Science
- Reproduction and Developmental Biology🇨🇿 NMgr. | Faculty of Science
- Biochemistry and Pathobiochemistry🇨🇿 PhD. | First Faculty of Medicine
- Demography🇨🇿 NMgr. | Faculty of Science