- Computer Science with specialisation in Web and Data Oriented Programming🇨🇿 Bc. | Faculty of Mathematics and Physics
- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Computational Mathematics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Mathematics for Information Technologies🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Geography and Cartography🇨🇿 Bc. | Faculty of Science
- Applied Geography with specialisation in Physical Geography and Geoinformatics🇨🇿 Bc. | Faculty of Science
- Applied Geography with specialisation in Social Geography and Geoinformatics🇨🇿 Bc. | Faculty of Science
- Computer Science with specialisation in General Computer Science🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Programming and Software Development🇨🇿 Bc. | Faculty of Mathematics and Physics
- Demography with specialisation in Demography with Economics🇨🇿 Bc. | Faculty of Science
- Economics and Finance🇨🇿 Bc. | Faculty of Social Sciences
- Central European Studies with specialisation in Hungarian Studies and Slovak Studies🇨🇿 NMgr. | Faculty of Arts
- Central European Studies with specialisation in Hungarian Studies with double curriculum study South East European Studies🇨🇿 NMgr. | Faculty of Arts
- Central European Studies with specialisation in Slovak Studies with double curriculum study Comparative Literature🇨🇿 NMgr. | Faculty of Arts
- Empirical and Comparative Linguistics with double curriculum study Central European Studies with specialisation in Polish Studies🇨🇿 NMgr. | Faculty of Arts
- Information Studies and Librarianship +1🇨🇿 Bc. | Faculty of Arts
- Political Science🇨🇿 NMgr. | Faculty of Social Sciences
- Geology with specialisation in Mineralogy and Crystallography🇨🇿 NMgr. | Faculty of Science
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Applied Geobiology🇨🇿 Bc. | Faculty of Science
- Geology with specialisation in Paleontology🇨🇿 NMgr. | Faculty of Science
- Demography +1🇨🇿 NMgr. | Faculty of Science
- Dental Hygiene🇨🇿 Bc. | Third Faculty of Medicine
- Physics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Medicinal Chemistry🇨🇿 Bc. | Faculty of Science
- Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Geology with specialisation in Economic Geology🇨🇿 NMgr. | Faculty of Science
