- Improved recovery and annotation of genes in metagenomes through the prediction of fungal introns2023 | Faculty of Science, Central Library of Charles University
- Contamination of the Arctic reflected in microbial metagenomes from the Greenland ice sheet2017 | Faculty of Science
- International conference organized as a part of MICOBION project in Prague with focus on omics data and advanced metagenomics data integration2022 | Faculty of Science
- Skin, gut, and sand metagenomic data on placebo-controlled sandbox biodiversity intervention study2023 | Second Faculty of Medicine
- Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure2021 | Second Faculty of Medicine
- Production, enrichment and immobilization of a metagenome-derived epoxide hydrolase2011 | Faculty of Science
- Revealing the metabolic capacity of Streblomastix strix and its bacterial symbionts using single-cell metagenomics2019 | Faculty of Science
- Influence of decades-lasting industrial production of β-lactams on the soil microbiome2015 | Central Library of Charles University
- Extended-spectrum beta-lactamase-producing Escherichia coli and antimicrobial resistance in municipal and hospital wastewaters in Czech Republic: Culture-based and metagenomic approaches2021 | Faculty of Medicine in Pilsen
- Virome Sequencing of Stool Samples2018 | Second Faculty of Medicine
- Gypsum endolithic phototrophs under moderate climate (Southern Sicily): their diversity and pigment composition2023 | Faculty of Science
- Exploring the environmental diversity of kinetoplastid flagellates in the high-throughput DNA sequencing era2015 | Faculty of Science
- Characteristics of microbial community of soil subjected to industrial production of antibiotics2020 | Faculty of Science
- Complex Response of the Chlorarachniophyte Bigelowiella natans to Iron Availability2021 | Faculty of Science
- Codiversification of gastrointestinal microbiota and phylogeny in passerines is not explained by ecological divergence2017 | Faculty of Science
- Predominant Biphenyl Dioxygenase From Legacy Polychlorinated Biphenyl (PCB)-Contaminated Soil Is a Part of Unusual Gene Cluster and Transforms Flavone and Flavanone2021 | Faculty of Science
- Population Genomics of Microbial Biostalactites: Non-recombinogenic Genome Islands and Microdiversification by Transposons2022 | Faculty of Science
- Gastrointestinal microbiota of wild and inbred individuals of two house mouse subspecies assessed using high-throughput parallel pyrosequencing2014 | Faculty of Science
- Distribution of SARS-CoV-2 Lineages in the Czech Republic, Analysis of Data from the First Year of the Pandemic2021 | Faculty of Science, Second Faculty of Medicine
- Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples2017 | Second Faculty of Medicine
- Temporal Stability and the Effect of Transgenerational Transfer on Fecal Microbiota Structure in a Long Distance Migratory Bird2017 | Faculty of Science
- The Virome of Healthy Honey Bee Colonies: Ubiquitous Occurrence of Known and New Viruses in Bee Populations2022 | Faculty of Science
- Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter2015 | Central Library of Charles University
- Deciphering the Ecology of Cystic Fibrosis Bacterial Communities: Towards Systems-Level Integration2019 | Second Faculty of Medicine
- Multi-omics signatures in new-onset diabetes predict metabolic response to dietary inulin: findings from an observational study followed by an interventional trial2023 | Central Library of Charles University, Faculty of Physical Education and Sport, Third Faculty of Medicine
- Dysbiosis of skin microbiome and gut microbiome in melanoma progression2022 | Faculty of Science
- Diversity of root-associated microbial populations of Tamarix parviflora cultivated under various conditions2018 | Faculty of Science
- Population genomics of post-glacial western Eurasia2024 | First Faculty of Medicine
- Quantitative CrAssphage real-time PCR assay derived from data of multiple geographically distant populations2018 | Second Faculty of Medicine
- Development of a simple high-throughput assay for directed evolution of enantioselective sulfoxide reductases2020 | Faculty of Science